All the SSRs can be select and download (CSV, EXCEL,...) with the primers pairs
Choose button view to access to the primers and the flanking sequences or e-PCR to search transferability of the selected marker
MarkerID | Sequence Name | Motif | Fp | Rp | psize | start | end | Fta | Rta | Reps | Size | Flanking | Code | View/ePCR | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
YMa144700 | LG14 | (CA)9 | TCCCCTAGCAAAACTCTCCT | TGTCCTTCGCTTTCGCTCTT | 292 | 16948977 | 16948994 | 57.656 | 59.966 | 9 | 292 | CCATAGAAAGGGATGTACCAAAACACAAACATTAGCAATTATGCTGTTTTACAGGGTCATAAATGCAAATTTCCCCTAGCAAAACTCTCCTAATTTTATTAAAAAGAATTATAAAGAAAATAGCATATTTATCATAATTTTATTAGAAATAGAATTATATAAACAATGATTTTCAATATCTATCCGCCTTAAAATTCCTCACACACACACACACACATATATACATATATATTCACACAATTATAATTGTTAGAATTTTTATTTTTATTATTATTTTTTTAAAAAATTCTTAGTAATAAATCAATGGTCACCGAAAACAGTACTTCGCTCACCCACCCAAGCGAAGAGCGAAAGCGAAGGACAATGCTCGCCAAGGTCTCGTCTTCGCTCGTCTCTTCGCTCCCGTGCTCTAGGGTTC | 10 |