Y2MD
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Wet-lab validated SSRs

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  3. Wet-lab Validated

Markers validate

Locus Motif Forward Reverse Origin Authors Access
Da1A01(GT)8TATAATCGGCCAGAGGTGTTGGAAGCATAGAGAADalata_v2Tostain and al. 2006
Da1F08(TG)13AATGCTTCGTAATCCAACCTATAAGGAATTGGTGCCDalata_v2Tostain and al. 2006
Dca3(GT)10CAGCCCACTTGCATAGAATGAGCTTGAGTCGGTGAGAAGGD.rotundataSilva and al. 2014
Dca4(CA)8(TA)6ATGGGGCACATAAATTAGGGCAATAAATAAACACTTGAGACACGAD.rotundataSilva and al. 2014
Dca6(TG)6TGCTTACTCCTTGACCCTCTAATGCATCCCAAACCTTGATTAD.rotundataSilva and al. 2014
E10(CA)12GAATACTGATGATGCATAAAGCAACCATGGTGAAGAGGATGGATDalata_v2Siqueira and al.2011
H2(CA)9AAACCAAACAGGCAAAGCATTGCCCTGCTTGTAAGATTGADalata_v2Siqueira and al.2011
mDaCIR106(tg)8GAATGGTTCACTGTTCTTTCAAACACTTACACCCTCCADalata_v2Arnau and al. 2017
mDaCIR11(ac)10TGAATCCTCAGCAGGAGAACATCAAACAATCAGCAACADalata_v2Arnau and al. 2017
mDaCIR116(ag)6(ag)8(ag)7AAATATCTTGGGTGTTGATGAACAATCATTTTGATGGACADalata_v2Arnau and al. 2017
mDaCIR117(ac)10AATTGTCTGGCCGTTCTTGATGGTTCATGGAAGCTGDalata_v2Arnau and al. 2017
mDaCIR17(ac)7GATTAGGTTGGACTTTGCATACCACTGCACTCAACAGCDalata_v2Arnau and al. 2017
mDaCIR179(tc)8CCCCATTTGAGGAGTTTTACTAACAAAGAACACATAGCTTCDalata_v2Arnau and al. 2017
mDaCIR19(at)7ACCCTTTTCCTTGCATCTTTGCTAAACCATGTAAATTCTCDalata_v2Arnau and al. 2017
mDaCIR2(ca)10CCCCTAGCAAAACTCTCCGTTTTCGGTGACCATTGADalata_v2Arnau and al. 2017
mDaCIR20(ga)16TGCCTTAATCTGCTGACACCATGGTGCTCCGATTCTADalata_v2Arnau and al. 2017
mDaCIR24(ac)7AGGCAAACGCAATACAAAGGGGACCCTACAAAGAAADalata_v2Arnau and al. 2017
mDaCIR26(tg)15(ga)14TTTTCCACCCTCAGCAACATAAAGAATGGCGGCTCTDalata_v2Arnau and al. 2017
mDaCIR45(ac)10TTCCGATGATCTCAAACCGGACGTAATCCCAACTGADalata_v2Arnau and al. 2017
mDaCIR51(ac)11(at)7TTGCTGAACCAAGAAATTACAGTGGTGAAGGTGCTACDalata_v2Arnau and al. 2017
mDaCIR56(tg)12CGGCTCATTCAAACAGAGAAATCAACCAGCCATCAADalata_v2Arnau and al. 2017
mDaCIR58(ac)7CGGAGGGCACTACTAACACAGCATTAGCAACCCAAGDalata_v2Arnau and al. 2017
mDaCIR59(tc)11(ca)9AGCTCGGAGAAAAGAAGCGAGCTTGTGTTTAATGTCCADalata_v2Arnau and al. 2017
mDaCIR60(ca)11CAAAGACCAGGGAATGTGAGAATGCAGAGCATGGTGDalata_v2Arnau and al. 2017
mDaCIR61(ag)21CTAACCCCTCCAAAGCTGGGGCATTCACGTCTTTATDalata_v2Arnau and al. 2017
mDaCIR62(tc)14(tc)9TCGTTCTGACACCCATTTGCGTGCTGCTTTCATATCDalata_v2Arnau and al. 2017
mDaCIR66(ag)9GATTTCGATGACACCCTTCAATTAACTCTTTCCCCATCCDalata_v2Arnau and al. 2017
mDaCIR73(gt)12CATTCCAAAGCAATGAACAGGCAAAGAGGTAGCCAAGDalata_v2Arnau and al. 2017
mDaCIR79(ac)7CCAAGTGATACACGTAACCATGATGCCAGCGAACTAATDalata_v2Arnau and al. 2017
mDaCIR84(tg)7AAAAGCTGTGGTCCTCCTAACACCTGATCTTAGTGCAAADalata_v2Arnau and al. 2017
mDaCIR9(aag)5GAATGAGCCCTTGCTACAACCAGCGTGGAAGTTTTADalata_v2Arnau and al. 2017
mDaCIR93(ct)9GAGGCTCATCAAACAAGGAACCGAACCAAATAGAACAADalata_v2Arnau and al. 2017
YM05(AAG)8AGGATTATCACTGAAAGGGCTCCTTCCAATTACTCTCCAAGAD.rotundataTamiru and al. 2015
YM12(ATC)5(AAC)8TGAGCATTCTTGTTTTGCCGCTTTCAGGGCGTGCATGGD.rotundataTamiru and al. 2015
YM13(CTT)8CCAATCACATCACGTCTAGTCTGACAATAGAAACTTCGAGACCCD.rotundataTamiru and al. 2015
YM15(CTT)7CCATCTCCTCCCTTATCTACACGGGATTGAAGTTCCAGAGACTAD.rotundataTamiru and al. 2015
YM17(AC)8TCCCTCAATTAAAGCATAGCCTCAGCCACCAAACATCTTGCTCD.rotundataTamiru and al. 2015
YM18(GT)19GACATTGGGGATCTCTTATCATTAGCAGCAGTAACGTTAAGGAAD.rotundataTamiru and al. 2015
YM21(GAT)5AATGATGCATCTGAGGATAGTGGATGCTATTACGACAACCTTGAD.rotundataTamiru and al. 2015
YM24(GTT)11GGTGTTGTTGGGTTTCATTGTCTCCCTCTTCTCATTTCACTCCCD.rotundataTamiru and al. 2015
YM27(GTT)8TCCAGCTCTTTAGCACAGGAGGAGCATAGGCAACAAGCD.rotundataTamiru and al. 2015
YM30(GT)16CCACAACTAAAAACACATGGACGTGGTAGGGTGTGTAGCTTCTTD.rotundataTamiru and al. 2015
YM32(CT)24GAGGTCTGCGACGGATTTGTCGCATTCTTCATCCTCTTCACD.rotundataTamiru and al. 2015
YM33(AAG)13ACCATGGGATGAAGGGAAGGGCATATGGTGCATGGGAGCD.rotundataTamiru and al. 2015
YM37(CT)15TCTCTTCTTCTTTGGCATCGCGGCAGCGAGTTCCTCAAATCD.rotundataTamiru and al. 2015
YM38(GT)8GAACCCCTGTCAAGTGAGCCTGAAGCTCGAACAAATGCAGD.rotundataTamiru and al. 2015
YM44(AG)20CGCAACCAGCAAAGGATTTAATTCTGTCTCTCAAAACCCCTD.rotundataTamiru and al. 2015
YM45(AT)6...(AT)7GCTGTTTTTGGGATTTAGTAGGGCAACTAGATATGCTTGGACACD.rotundataTamiru and al. 2015
YM46(AC)8...(AC)15ACTTGACATCCAGAAGGTGCGCTGTAACTTATCAAGGGTAGCD.rotundataTamiru and al. 2015
YM55(CT)11...(AC)18TCTTCCGAGATATACACATCCAACAGTGACAATGAGAAGGAACAD.rotundataTamiru and al. 2015
YM62(CT)10...(CT)25GAGCTCTCCTCTAGACCTTCACCCAACGGCCTAGATTGCTCD.rotundataTamiru and al. 2015
YM66(AT)7(GT)17ATATTGACTGACCACCAGATCAGAAGAGTCTTGGATTTCTACCAD.rotundataTamiru and al. 2015
YM67(GT)22GGCTGACTTGTGTAAACTCTTGTGTAGATGAGGCAAGAAGTGATD.rotundataTamiru and al. 2015
YM74(CT)12...(GT)19TGGTGTTTGAGAATGGAGGATTGACTTGATCTTTGTCTTGATGGCD.rotundataTamiru and al. 2015
YM77(GT)15ATGTGGCCCTTTCTCTTGCGAGTAGCGGTGGTTGTGTGD.rotundataTamiru and al. 2015
YM78(GT)10ATGACTACTGCAAGGACAACAGGGTGATATGCATGATTCAACCTD.rotundataTamiru and al. 2015
YM80(CTT)13CCGCCCAATCACATCACATCTCCCAAGAAGTCTGAGCCGD.rotundataTamiru and al. 2015
YM83(GT)13TCGGAATTCAACTGTGATGGCAGCACACCATTCACACATAGGD.rotundataTamiru and al. 2015
YM86(AC)7...(AC)15GCGCAAAGCTGTATCTGGCCTGTCCCATTAGGGCACTTGD.rotundataTamiru and al. 2015
YM87(AC)13AGGCCGAGAAAGAAATGATATTGGAGAAGGTTGGTAATTGCCCCD.rotundataTamiru and al. 2015
YM88(AAT)5...(ACAT)9CTTTATCCATTAGAGCTTTGGGGTGAAATAACCTAGCAAATCCCD.rotundataTamiru and al. 2015
YMac118(A)10TCATCCTCTCCCTGTCAGCGGTAGTTGCTGCCATGGTGCADalata_v2Diouf and al. 2023
YMac135(TCA)13TGCAGAAGTTCACCGCTCAGCCTTCCTTGCTCAGCTGTGGDalata_v2Diouf and al. 2023
YMac15(T)12AGGCTTGGGCGAACTTTTGAAGGGCTCGTCGTTTTGACCTDalata_v2Diouf and al. 2023
YMac2(A)12AGATGCCACGACGCAAACTTGCAGCCGATCCTCAAAGGTCDalata_v2Diouf and al. 2023
YMac33(A)11GCTTGCTGATAAAAACCGGAGCTCTGGAGGAGTGTTGTCGAGADalata_v2Diouf and al. 2023
YMac45(AC)9TGAGACCACTTCGTGTCTTGAGGCACCTTCATGATGCAGCCTDalata_v2Diouf and al. 2023
YMac59(ATC)7CGCCCATTCCCTCAAAAGCTAGCCGGGATGTTGGACAAAGDalata_v2Diouf and al. 2023
YMac82(AT)18GGCTTCATTGGCTCTGGCTTGCCAGCAAGAAATGGACCCADalata_v2Diouf and al. 2023
YMac92(A)11GCAGTTGACACACACGAGACACATGTGGATCGCTCATGCCADalata_v2Diouf and al. 2023
YMar11(TTG)6CTCTGCCAAGGCCAAGAAGGAAACCAGCTGGCAGCATGTTDalata_v2Diouf and al. 2023
YMar128(GA)15CGGCGACAAGAGAACAAGCACCACCTCCTTGAACATCGCCDalata_v2Diouf and al. 2023
YMar28(TA)23AGCTCATGGTTGGTTGCACAGGCCATACACTTTGCCTCCCDalata_v2Diouf and al. 2023
YMar39(A)10AGACCCAAGCTGCAAAGCAATGACAGAGCCAACACAGAGGADalata_v2Diouf and al. 2023
YMar4(TA)7CAGGGCAAGAAGAGGGCAAGGCTTTTCCAGTCACCTGTCCADalata_v2Diouf and al. 2023
YMar44(AT)13TCCAGGAGCTTGGGTGATGTGAAGACCTTCCCCACATGCADalata_v2Diouf and al. 2023
YMar65(A)15ACTTGCATACCCAACCCCACTACTGAGGAAGGTGCTGCCADalata_v2Diouf and al. 2023
YMar79(CCA)9ACTATGTCAGCACCCACCCCAAACTGGGGAGCAGTTGCACDalata_v2Diouf and al. 2023
YMar90(GA)9AGAGTGCCAGCCTCAGTTACAAGGAAGGCGCTCTTTGATGCDalata_v2Diouf and al. 2023
YMO6(AAG)18ACAGAGCTGTTGACACAAACACCTCAATGAACCTTTGGTCTAD.rotundataTamiru and al. 2015



Y 2 M D

Yam Microsatellite Markers Database

CIRAD
DEFI
UCAD

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