All the SSRs can be select and download (CSV, EXCEL,...) with the primers pairs
Choose button view to access to the primers and the flanking sequences or e-PCR to search transferability of the selected marker
MarkerID | Sequence Name | Motif | Fp | Rp | psize | start | end | Fta | Rta | Reps | Size | Flanking | Code | View/ePCR | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
YMa168874 | LG16 | (CA)12 | AGCTTGTTGGCATTCTCCGA | AGTGTGTGCATGTGTGTGTG | 182 | 19742490 | 19742513 | 59.963 | 59.266 | 12 | 182 | GAAATAGATGCCAGTTACGGGAAAAGGAAATTGAGATTAAGGAGCTAAAGGAACAAATGAATGAGCTTGTTGGCATTCTCCGACTTAGCGAAGCTCGGAGAAAAGAAGCAGAGAAGCAGTTGAAATCAAGAGAGGATACTATGGCCGCTGCACCGGCTACACCACCACCTTCAGTGAGGCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACGCACACACACATGCACACACTAAGATACTCACAAAATCATTAGAATAGTTTTTCTCTCTGGGATGGACATTAAACACAAGCTCAAATAGGAAAGAATTCATAGAGAAAATGTTAAGTGAAAGATTGCATGTTTGTTAGTTATATACCGGGATGAAAACAAGAATCCAAGAGTGATTTATGTTCTTGTGGGGTACCATCTT | 10 |