All the SSRs can be select and download (CSV, EXCEL,...) with the primers pairs
Choose button view to access to the primers and the flanking sequences or e-PCR to search transferability of the selected marker
| MarkerID | Sequence Name | Motif | Fp | Rp | psize | start | end | Fta | Rta | Reps | Size | Flanking | Code | View/ePCR | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| YMa198298 | LG18 | (TA)12 | TGTGTGTGTGTGTGTGTGTG | CCTCCTCCTCCTCCTCCTTC | 242 | 226417 | 226440 | 59.129 | 60.106 | 12 | 242 | CACTAAGTGACTAGACTATTCTATTCATGAGAGAAAGGCACTATTGCAACTTGCAGAGAGGCTAGCTAGCAAAGAATAATGACCTCTAGACATAGGAAAGGAGAATTATTATTATTATTGTTGTGTGTGTGTGTGTGTGTGTGAAAGACTAATGCACTCTTTTTATTTGTTTCTCTAATATTACCTAGATTCACAAGTGTATATATATATATATATATATATATCTTGATCATTTGGATACATTTAATGAAAAAAGAGTTAGATGGATGGTTGATATTATAAACAGAATTAGTATTTAGATTGTTTTCAAACGTTGGACTTTTAACATCTTTGGGATAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAAGAAGATGTGGAAATTAATTAGTATTTTAAAGGGTGGGTTACAGCTAATGGATAT | 10 | ||
| YMa198298 | LG18 | (TA)12 | TGTGTGTGTGTGTGTGTGTG | CCTCCTCCTCCTCCTCCTTC | 242 | 226417 | 226440 | 59.129 | 60.106 | 12 | 242 | CACTAAGTGACTAGACTATTCTATTCATGAGAGAAAGGCACTATTGCAACTTGCAGAGAGGCTAGCTAGCAAAGAATAATGACCTCTAGACATAGGAAAGGAGAATTATTATTATTATTGTTGTGTGTGTGTGTGTGTGTGTGAAAGACTAATGCACTCTTTTTATTTGTTTCTCTAATATTACCTAGATTCACAAGTGTATATATATATATATATATATATATCTTGATCATTTGGATACATTTAATGAAAAAAGAGTTAGATGGATGGTTGATATTATAAACAGAATTAGTATTTAGATTGTTTTCAAACGTTGGACTTTTAACATCTTTGGGATAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAAGAAGATGTGGAAATTAATTAGTATTTTAAAGGGTGGGTTACAGCTAATGGATAT | 12 |